modPDZpep: Strucure-based analysis of human PDZ-mediated interaction networks

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Rank peptidesRank peptides for a human PDZ domain based on their score
Rank PDZRank human PDZ domains given a peptide
PDmapper A tool to map Phage display/predicted peptides to human C-terminal proteome and analyze protein network.
Rank by alignment methodIf you have a new PDZ sequence, you can map binding pocket profile from already existing template by alignment method.